- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
| Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | xenTro2-18 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_14514 | + | 50-70 | 7113-7190 | 0.984981 | Paralog | 2/4 | 21/24 |
| 2 | xenTro2-13 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_12328 | + | 50-70 | 2910-2987 | 0.962932 | Paralog | 2/4 | 21/24 |
| 3 | xenTro2-113 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | - | 50-70 | 32738-32815 | 0.984981 | Paralog | 2/4 | 21/24 |
| 4 | xenTro2-114 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | - | 50-70 | 34352-34429 | 0.951778 | Paralog | 2/4 | 21/24 |
| 5 | xenTro2-115 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | - | 49-69 | 35958-36034 | 0.97861 | Paralog | 2/4 | 21/24 |
| 6 | xenTro2-116 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | - | 22-42 | 37248-37332 | 0.903642 | Paralog | 2/4 | 21/24 |
| 7 | xenTro2-105 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | + | 50-70 | 109124-109201 | 0.984981 | Paralog | 2/4 | 21/24 |
| 8 | xenTro2-107 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | + | 50-70 | 110411-110488 | 0.961737 | Paralog | 2/4 | 21/24 |
| 9 | xenTro2-109 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | + | 51-71 | 112338-112418 | 0.980293 | Paralog | 2/4 | 21/24 |
| 10 | xenTro2-111 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_7891 | + | 51-71 | 120426-120506 | 0.980293 | Paralog | 2/4 | 21/24 |
| 11 | xenTro2-93 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_680 | - | 50-70 | 535827-535904 | 0.984981 | Paralog | 2/4 | 21/24 |
| 12 | xenTro2-94 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_680 | - | 50-70 | 550942-551019 | 0.984981 | Paralog | 2/4 | 21/24 |
| 13 | xenTro2-95 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_680 | - | 50-70 | 552965-553042 | 0.984981 | Paralog | 2/4 | 21/24 |
| 14 | xenTro2-96 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_680 | - | 50-70 | 554579-554656 | 0.984981 | Paralog | 2/4 | 21/24 |
| 15 | xenTro2-97 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_680 | - | 50-70 | 558704-558781 | 0.984981 | Paralog | 2/4 | 21/24 |
| 16 | xenTro2-91 | Xenopus tropicalis | xla-miR-427 | 21/22 | scaffold_675 | + | 51-72 | 9517-9596 | 0.858403 | Paralog | 2/4 | 21/24 |
| 17 | xenTro2-88 | Xenopus tropicalis | xla-miR-427 | 20/22 | scaffold_675 | + | 50-70 | 2649-2726 | 0.984981 | Paralog | 2/4 | 21/24 |
| 18 | xenTro2-18 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_14514 | + | 51-72 | 7111-7192 | 0.978635 | Paralog | 2/4 | 21/24 |
| 19 | xenTro2-13 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_12328 | + | 51-72 | 2908-2989 | 0.945933 | Paralog | 2/4 | 21/24 |
| 20 | xenTro2-113 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | - | 49-70 | 32738-32815 | 0.985841 | Paralog | 2/4 | 21/24 |
| 21 | xenTro2-114 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | - | 49-70 | 34352-34429 | 0.950372 | Paralog | 2/4 | 21/24 |
| 22 | xenTro2-115 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | - | 48-69 | 35958-36034 | 0.977553 | Paralog | 2/4 | 21/24 |
| 23 | xenTro2-116 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | - | 21-42 | 37248-37332 | 0.894191 | Paralog | 2/4 | 21/24 |
| 24 | xenTro2-105 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | + | 51-72 | 109122-109203 | 0.978635 | Paralog | 2/4 | 21/24 |
| 25 | xenTro2-107 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | + | 51-72 | 110409-110490 | 0.944253 | Paralog | 2/4 | 21/24 |
| 26 | xenTro2-109 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | + | 51-72 | 112337-112419 | 0.958321 | Paralog | 2/4 | 21/24 |
| 27 | xenTro2-111 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_7891 | + | 51-72 | 120425-120507 | 0.958321 | Paralog | 2/4 | 21/24 |
| 28 | xenTro2-93 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_680 | - | 49-70 | 535827-535904 | 0.985841 | Paralog | 2/4 | 21/24 |
| 29 | xenTro2-94 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_680 | - | 49-70 | 550942-551019 | 0.985841 | Paralog | 2/4 | 21/24 |
| 30 | xenTro2-95 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_680 | - | 49-70 | 552965-553042 | 0.985841 | Paralog | 2/4 | 21/24 |
| 31 | xenTro2-96 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_680 | - | 49-70 | 554579-554656 | 0.985841 | Paralog | 2/4 | 21/24 |
| 32 | xenTro2-97 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_680 | - | 49-70 | 558704-558781 | 0.985841 | Paralog | 2/4 | 21/24 |
| 33 | xenTro2-91 | Xenopus tropicalis | xtr-miR-427 | 22/23 | scaffold_675 | + | 50-72 | 9517-9596 | 0.843028 | Paralog | 2/4 | 21/24 |
| 34 | xenTro2-88 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_675 | + | 51-72 | 2647-2728 | 0.978635 | Paralog | 2/4 | 21/24 |
| 35 | xenTro2-90 | Xenopus tropicalis | xtr-miR-427 | 21/23 | scaffold_675 | + | 22-43 | 7349-7434 | 0.990332 | Paralog | 2/4 | 21/24 |
| 36 | xtr-mir-427-2 | Xenopus tropicalis | xtr-miR-427 | 23/23 | scaffold_14514 | - | 44-66 | N/A | - | miRBase_13_0 | 2/4 | 21/24 |
| 37 | xtr-mir-427-3 | Xenopus tropicalis | xtr-miR-427 | 23/23 | scaffold_8346 | - | 44-66 | N/A | - | miRBase_13_0 | 2/4 | 21/24 |
| 38 | xtr-mir-427-1 | Xenopus tropicalis | xtr-miR-427 | 23/23 | scaffold_12328 | + | 44-66 | N/A | - | miRBase_13_0 | 2/4 | 21/24 |
| Total | 38 record(s). | |||||||||||